Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sucrose-6-phosphate hydrolase | SAMEA3752620_00217 | Not Available | Negative | 236972 - 238405 | 54382.9 |
| aminoimidazole riboside kinase | SAMEA3752620_00218 | Not Available | Positive | 238621 - 239535 | 33080.7 |
| galactoside permease | SAMEA3752620_00219 | Not Available | Positive | 239607 - 240854 | 46926.3 |
| Trna-arg | Not Available | Not Available | Positive | 241295 - 241369 | Not Available |
| transporter protein | SAMEA3752620_00221 | Not Available | Negative | 241445 - 242377 | 34484.2 |
| lipoprotein | SAMEA3752620_00222 | Not Available | Positive | 242671 - 243426 | 28009.2 |
| long-chain fatty acid transport protein | SAMEA3752620_00223 | Not Available | Negative | 243488 - 244828 | 48623.1 |
| protein yfcz | SAMEA3752620_00224 | Not Available | Positive | 245200 - 245484 | 10318.2 |
| fatty acid oxidation comple beta subunit (3 -ketoacyl-coa thiolase) | SAMEA3752620_00225 | Not Available | Positive | 245666 - 246976 | 46540.4 |
| fatty acid oxidation complex alpha subunit | SAMEA3752620_00226 | Not Available | Positive | 246976 - 249120 | 77190.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





