Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(iii) dicitrate sensor protein | SAMEA3752620_04819 | Not Available | Positive | 4980152 - 4981105 | 35534.1 |
| iron(iii) dicitrate tonb-dependent receptor | SAMEA3752620_04820 | Not Available | Positive | 4981192 - 4983516 | 85353.3 |
| iron-dicitrate transporter substrate-binding subunit | SAMEA3752620_04821 | Not Available | Positive | 4983561 - 4984463 | 33122.1 |
| iron(iii) dicitrate transport system, permease protein | SAMEA3752620_04822 | Not Available | Positive | 4984460 - 4985458 | 34896.9 |
| iron-dicitrate transporter subunit fecd | SAMEA3752620_04823 | Not Available | Positive | 4985455 - 4986411 | 34152.7 |
| iron(iii) dicitrate transport system, atp-binding protein | SAMEA3752620_04824 | Not Available | Positive | 4986412 - 4987179 | 28192.5 |
| kple2 phage-like element | SAMEA3752620_04825 | Not Available | Negative | 4987737 - 4987994 | 9465.12 |
| putative transposase | SAMEA3752620_04826 | Not Available | Negative | 4988077 - 4988451 | 14497.8 |
| is600 orfab' transposase | SAMEA3752620_04827 | Not Available | Positive | 4989007 - 4989879 | 33871.4 |
| putative prop effector | SAMEA3752620_04828 | Not Available | Positive | 4989836 - 4990339 | 19263.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





