Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| respiratory nitrate reductase 2 alpha chain | SAMEA3752620_04723 | Not Available | Positive | 4896227 - 4899967 | 140136.0 |
| respiratory nitrate reductase 2 subunit beta | SAMEA3752620_04724 | Not Available | Positive | 4899964 - 4901508 | 58575.1 |
| respiratory nitrate reductase 2 subunit delta | SAMEA3752620_04725 | Not Available | Positive | 4901508 - 4902203 | 26188.2 |
| nitrate reductase 2 subunit gamma | SAMEA3752620_04726 | Not Available | Positive | 4902200 - 4902880 | 25713.2 |
| phenazine biosynthesis protein phzf family protein | SAMEA3752620_04727 | Not Available | Positive | 4902960 - 4903853 | 32275.4 |
| putative n-hydroxyarylamine o-acetyltransferase | SAMEA3752620_04728 | Not Available | Negative | 4903949 - 4904794 | 32239.4 |
| flavin reductase-like protein | SAMEA3752620_04729 | Not Available | Positive | 4904969 - 4905538 | 20945.1 |
| 4-oxalocrotonate tautomerase | SAMEA3752620_04730 | Not Available | Negative | 4905542 - 4905769 | 8562.26 |
| metallo-beta-lactamase family protein | SAMEA3752620_04731 | Not Available | Positive | 4906075 - 4908051 | 72697.0 |
| diguanylate cyclase | SAMEA3752620_04732 | Not Available | Positive | 4908146 - 4909195 | 39137.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





