Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4884685 - 4884759 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 4884876 - 4884960 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 4884969 - 4885044 | Not Available |
| pantothenate kinase | SAMEA3752620_04713 | Not Available | Positive | 4885430 - 4886356 | 35416.6 |
| bifunctional protein | SAMEA3752620_04714 | Not Available | Negative | 4886385 - 4887350 | 35331.1 |
| udp-n-acetylenolpyruvoylglucosamine reductase | SAMEA3752620_04715 | Not Available | Negative | 4887347 - 4888375 | 37830.2 |
| formate dehydrogenase-n subunit gamma | SAMEA3752620_04718 | Not Available | Negative | 4888768 - 4889421 | 25351.9 |
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | SAMEA3752620_04719 | Not Available | Negative | 4889414 - 4890298 | 32240.4 |
| inner membrane protein | SAMEA3752620_04721 | Not Available | Positive | 4893647 - 4894471 | 29448.6 |
| nitrite extrusion protein 2 | SAMEA3752620_04722 | Not Available | Positive | 4894744 - 4896132 | 49912.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





