Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter yfdv | SAMEA3752620_00207 | Not Available | Positive | 224506 - 225450 | 33617.9 |
| coa-transferase | SAMEA3752620_00208 | Not Available | Positive | 225524 - 226669 | 41759.3 |
| hybrid sensory histidine kinase in two-component regulatory system with evga | SAMEA3752620_00209 | Not Available | Negative | 226725 - 229139 | 90562.4 |
| hybrid sensory histidine kinase in two-component regulatory system with evga | SAMEA3752620_00210 | Not Available | Negative | 229248 - 230318 | 40140.1 |
| dna-binding transcriptional activator evga | SAMEA3752620_00211 | Not Available | Negative | 230323 - 230937 | 22691.5 |
| emrky-tolc multidrug resistance efflux pump, membrane fusion protein component | SAMEA3752620_00212 | Not Available | Positive | 231353 - 232516 | 42628.9 |
| multidrug resistance protein y | SAMEA3752620_00213 | Not Available | Positive | 232516 - 234054 | 55972.4 |
| d-serine dehydratase | SAMEA3752620_00214 | Not Available | Negative | 234162 - 235490 | 47877.3 |
| permease dsdx | SAMEA3752620_00215 | Not Available | Negative | 235508 - 235726 | 7740.56 |
| csc operon repressor | SAMEA3752620_00216 | Not Available | Positive | 236011 - 236964 | 35131.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





