Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease v | SAMEA3752620_04688 | Not Available | Negative | 4861617 - 4862288 | 24673.9 |
| uroporphyrinogen decarboxylase | SAMEA3752620_04689 | Not Available | Negative | 4862445 - 4863509 | 39250.4 |
| nadh pyrophosphatase | SAMEA3752620_04690 | Not Available | Negative | 4863549 - 4864322 | 29704.6 |
| regulator of sigma d | SAMEA3752620_04691 | Not Available | Positive | 4864417 - 4864893 | 18243.9 |
| thiamine biosynthesis protein thic | SAMEA3752620_04693 | Not Available | Positive | 4865126 - 4867021 | 70772.3 |
| thiamine-phosphate pyrophosphorylase | SAMEA3752620_04694 | Not Available | Positive | 4867021 - 4867656 | 23059.8 |
| thiazole biosynthesis protein thif | SAMEA3752620_04695 | Not Available | Positive | 4867649 - 4868404 | 26952.3 |
| sulfur carrier protein this | SAMEA3752620_04696 | Not Available | Positive | 4868388 - 4868588 | 7323.77 |
| thiamin biosynthesis, thiazole moiety | SAMEA3752620_04697 | Not Available | Positive | 4868590 - 4869360 | 26871.6 |
| thiamine biosynthesis protein | SAMEA3752620_04698 | Not Available | Positive | 4869357 - 4870490 | 43303.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





