Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component response regulator | SAMEA3752620_04677 | Not Available | Negative | 4852072 - 4852743 | 25536.7 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SAMEA3752620_04679 | Not Available | Positive | 4853567 - 4855156 | 57380.5 |
| phosphoribosylglycineamide synthetase | SAMEA3752620_04680 | Not Available | Positive | 4855168 - 4856457 | 45969.9 |
| two-component system response regulator | SAMEA3752620_04681 | Not Available | Negative | 4856454 - 4857779 | 48542.6 |
| sensor protein zras | SAMEA3752620_04682 | Not Available | Negative | 4857776 - 4859152 | 50378.9 |
| uncharacterised protein | SAMEA3752620_04683 | Not Available | Positive | 4859259 - 4859387 | 5024.87 |
| zinc resistance protein | SAMEA3752620_04684 | Not Available | Positive | 4859390 - 4859815 | 15241.3 |
| membrane protein | SAMEA3752620_04685 | Not Available | Negative | 4859817 - 4860452 | 24031.1 |
| dna-binding protein hu-alpha | SAMEA3752620_04686 | Not Available | Negative | 4860525 - 4860797 | 9535.51 |
| protein of uncharacterised function (duf416) | SAMEA3752620_04687 | Not Available | Negative | 4860984 - 4861574 | 22581.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





