Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| surface antigen domain protein | SAMEA3752620_04657 | Not Available | Positive | 4829806 - 4830345 | 18935.7 |
| tetr family transcriptional regulator | SAMEA3752620_04658 | Not Available | Negative | 4830407 - 4831039 | 23480.1 |
| protein involved in stress resistance and biofilm formation | SAMEA3752620_04659 | Not Available | Positive | 4831280 - 4831537 | 8815.55 |
| putative peptidoglycan-binding protein | SAMEA3752620_04660 | Not Available | Negative | 4831620 - 4832579 | 34490.7 |
| transcription-repair coupling factor | SAMEA3752620_04661 | Not Available | Negative | 4832726 - 4836220 | 131865.0 |
| putative acyltransferase | SAMEA3752620_04662 | Not Available | Negative | 4836300 - 4837373 | 40901.0 |
| outer membrane-specific lipoprotein transporter subunit lolc | SAMEA3752620_04663 | Not Available | Positive | 4837635 - 4838834 | 43266.5 |
| lipoprotein transporter atp-binding subunit | SAMEA3752620_04664 | Not Available | Positive | 4838827 - 4839528 | 25453.9 |
| lipoprotein-releasing system transmembrane protein | SAMEA3752620_04665 | Not Available | Positive | 4839534 - 4840772 | 45105.7 |
| n-acetyl-d-glucosamine kinase | SAMEA3752620_04666 | Not Available | Positive | 4840801 - 4841712 | 33086.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





