Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3752620_04637 | Not Available | Positive | 4810191 - 4810580 | 14389.4 |
| prophage cp-933o is protein | SAMEA3752620_04638 | Not Available | Positive | 4810577 - 4810924 | 12753.8 |
| transposase | SAMEA3752620_04639 | Not Available | Negative | 4811020 - 4812612 | 60347.9 |
| transposase | SAMEA3752620_04640 | Not Available | Negative | 4812643 - 4812993 | 13231.2 |
| transposase | SAMEA3752620_04641 | Not Available | Negative | 4812990 - 4813415 | 15906.0 |
| putative transposase protein | SAMEA3752620_04642 | Not Available | Positive | 4813585 - 4814736 | 44248.1 |
| 4-amino-4-deoxychorismate lyase | SAMEA3752620_04643 | Not Available | Positive | 4815559 - 4816368 | 29785.0 |
| putative aminodeoxychorismate lyase | SAMEA3752620_04644 | Not Available | Positive | 4816371 - 4817393 | 38265.5 |
| thymidylate kinase | SAMEA3752620_04645 | Not Available | Positive | 4817383 - 4818024 | 23761.5 |
| dna polymerase iii subunit delta' | SAMEA3752620_04646 | Not Available | Positive | 4818021 - 4819025 | 37010.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





