Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMEA3752620_04627 | Not Available | Positive | 4799361 - 4800185 | 29547.8 |
| uncharacterized protein conserved in bacteria | SAMEA3752620_04628 | Not Available | Negative | 4800342 - 4801685 | 49215.2 |
| truncated transposase | SAMEA3752620_04629 | Not Available | Negative | 4802491 - 4802733 | 9354.74 |
| glycerol-3-phosphate abc transporter, substrate-binding protein | SAMEA3752620_04630 | Not Available | Negative | 4803180 - 4804496 | 48473.3 |
| uncharacterised protein | SAMEA3752620_04631 | Not Available | Positive | 4804861 - 4804968 | 3766.72 |
| putative transposase | SAMEA3752620_04632 | Not Available | Positive | 4805603 - 4805863 | 9853.3 |
| is2 orf2 | SAMEA3752620_04633 | Not Available | Positive | 4806320 - 4806580 | 9637.53 |
| putative outer membrane heme/hemoglobin receptor | SAMEA3752620_04634 | Not Available | Positive | 4806840 - 4808810 | 72171.0 |
| nickel uptake substrate-specific transmembrane region | SAMEA3752620_04635 | Not Available | Positive | 4808829 - 4809620 | 29401.8 |
| transposase orf1 of is683 | SAMEA3752620_04636 | Not Available | Positive | 4809862 - 4810038 | 6648.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





