Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized gtp-binding protein yjia | SAMEA3752620_04595 | Not Available | Negative | 4760164 - 4761357 | 44768.0 |
| is2 element protein | SAMEA3752620_04596 | Not Available | Negative | 4762581 - 4763486 | 34427.1 |
| transposase | SAMEA3752620_04597 | Not Available | Negative | 4763444 - 4763809 | 13399.4 |
| lambdoid prophage dlp12 bor-like protein | SAMEA3752620_04598 | Not Available | Positive | 4764436 - 4764729 | 10448.8 |
| putative dna-binding protein | SAMEA3752620_04600 | Not Available | Positive | 4765604 - 4765894 | 11225.9 |
| transposase | SAMEA3752620_04601 | Not Available | Positive | 4766079 - 4766639 | 21764.4 |
| irob | SAMEA3752620_04602 | Not Available | Positive | 4767875 - 4768990 | 40280.6 |
| iroc | SAMEA3752620_04603 | Not Available | Positive | 4769130 - 4772789 | 131863.0 |
| esterase | SAMEA3752620_04604 | Not Available | Positive | 4772893 - 4774122 | 44665.6 |
| iroe protein | SAMEA3752620_04605 | Not Available | Positive | 4774207 - 4775163 | 35443.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





