Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| barrel cupin 2 domain-containing protein | SAMEA3752620_04552 | Not Available | Negative | 4716074 - 4716397 | 11997.5 |
| gluconate 5-dehydrogenase | SAMEA3752620_04553 | Not Available | Negative | 4716452 - 4717252 | 28730.9 |
| putative oligogalacturonide lyase | SAMEA3752620_04554 | Not Available | Negative | 4717282 - 4718454 | 45105.0 |
| ribose/galactose isomerase | SAMEA3752620_04555 | Not Available | Positive | 4718705 - 4719343 | 23253.9 |
| transcriptional regulator | SAMEA3752620_04556 | Not Available | Negative | 4719663 - 4719860 | 7790.32 |
| malate transporter | SAMEA3752620_04557 | Not Available | Negative | 4720248 - 4720814 | 21330.7 |
| dna-directed rna polymerase, beta subunit/140 kd subunit | SAMEA3752620_04558 | Not Available | Negative | 4721286 - 4721711 | 15720.9 |
| dna-directed rna polymerase, beta subunit/140 kd subunit | SAMEA3752620_04559 | Not Available | Negative | 4721708 - 4722091 | 14874.3 |
| protein of uncharacterised function (duf3296) | SAMEA3752620_04560 | Not Available | Negative | 4722463 - 4723062 | 23249.1 |
| uncharacterised protein | SAMEA3752620_04561 | Not Available | Positive | 4724509 - 4725300 | 30460.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





