Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3752620_04542 | Not Available | Negative | 4702477 - 4702569 | 3413.21 |
| putative transposase (partial) | SAMEA3752620_04543 | Not Available | Negative | 4702744 - 4702998 | 9546.79 |
| deoxyribose specific mutarotase | SAMEA3752620_04544 | Not Available | Negative | 4703420 - 4704433 | 38147.6 |
| major facilitator superfamily protein | SAMEA3752620_04545 | Not Available | Negative | 4704445 - 4705761 | 48405.1 |
| deoxyribokinase | SAMEA3752620_04546 | Not Available | Negative | 4705789 - 4706709 | 33223.8 |
| transcriptional regulator | SAMEA3752620_04547 | Not Available | Positive | 4707015 - 4707797 | 29051.2 |
| membraneprotein | SAMEA3752620_04548 | Not Available | Positive | 4709336 - 4709794 | 18022.3 |
| uncharacterised protein | SAMEA3752620_04549 | Not Available | Negative | 4710885 - 4711847 | 38096.8 |
| exopolygalacturonate lyase | SAMEA3752620_04550 | Not Available | Negative | 4711958 - 4714192 | 83065.0 |
| putative oligogalacturonide transporter | SAMEA3752620_04551 | Not Available | Negative | 4714194 - 4715708 | 57307.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





