Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotase | SAMEA3752620_04450 | Not Available | Positive | 4605766 - 4606812 | 38814.6 |
| damage-inducible protein | SAMEA3752620_04451 | Not Available | Positive | 4606886 - 4607131 | 8949.43 |
| biofilm formation regulatory protein bsss | SAMEA3752620_04452 | Not Available | Positive | 4607421 - 4607675 | 9643.33 |
| n-methyl-l-tryptophan oxidase | SAMEA3752620_04453 | Not Available | Positive | 4607790 - 4608908 | 40932.2 |
| small protein involved in biofilm formation and acid stress response | SAMEA3752620_04454 | Not Available | Positive | 4608956 - 4609069 | 4735.1 |
| putative cytochrome | SAMEA3752620_04455 | Not Available | Positive | 4609330 - 4609896 | 20726.5 |
| protein ycei precursor | SAMEA3752620_04456 | Not Available | Positive | 4609900 - 4610475 | 20913.6 |
| rhodanase-like protein | SAMEA3752620_04457 | Not Available | Negative | 4610517 - 4611569 | 39727.3 |
| lipid a biosynthesis lauroyl acyltransferase | SAMEA3752620_04458 | Not Available | Positive | 4611794 - 4612714 | 35408.9 |
| drug efflux system protein mdtg | SAMEA3752620_04459 | Not Available | Positive | 4612886 - 4614112 | 43870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





