Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer surface exclusion protein trat | SAMEA3752620_04386 | Not Available | Positive | 4547076 - 4547807 | 25875.1 |
| uncharacterised protein | SAMEA3752620_04387 | Not Available | Negative | 4549177 - 4549383 | 7739.42 |
| conjugal transfer protein trad | SAMEA3752620_04388 | Not Available | Positive | 4550344 - 4550829 | 18093.7 |
| conjugal transfer nickase/helicase trai | SAMEA3752620_04389 | Not Available | Positive | 4551419 - 4556944 | 200342.0 |
| conjugal transfer pilus acetylation protein trax | SAMEA3752620_04390 | Not Available | Positive | 4556964 - 4557710 | 27299.6 |
| conjugal transfer fertility inhibition protein fino | SAMEA3752620_04391 | Not Available | Positive | 4557765 - 4558325 | 21146.8 |
| nuclease | SAMEA3752620_04392 | Not Available | Positive | 4558922 - 4559380 | 17654.4 |
| w0003 | SAMEA3752620_04393 | Not Available | Positive | 4559674 - 4560240 | 21966.3 |
| replication regulatory protein repa2 (protein copb) | SAMEA3752620_04394 | Not Available | Positive | 4560504 - 4560764 | 10037.4 |
| replication protein of incfii family | SAMEA3752620_04396 | Not Available | Positive | 4561055 - 4561912 | 32722.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





