Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal pilus assembly protein traf | SAMEA3752620_04376 | Not Available | Positive | 4539326 - 4539532 | 7681.23 |
| conjugal transfer protein trba | SAMEA3752620_04377 | Not Available | Positive | 4539548 - 4539895 | 12916.5 |
| conjugative transfer protein | SAMEA3752620_04378 | Not Available | Positive | 4540556 - 4540840 | 10965.5 |
| incf transfer protein trbb | SAMEA3752620_04379 | Not Available | Positive | 4540827 - 4541372 | 19786.0 |
| conjugal transfer protein trbj | SAMEA3752620_04380 | Not Available | Positive | 4541362 - 4541664 | 10874.4 |
| conjugal transfer pilus assembly protein trah | SAMEA3752620_04381 | Not Available | Positive | 4541661 - 4543037 | 50395.4 |
| pilus assembly protein | SAMEA3752620_04382 | Not Available | Positive | 4543034 - 4543279 | 8911.13 |
| conjugal transfer pilus assembly protein trah | SAMEA3752620_04383 | Not Available | Positive | 4543432 - 4543734 | 11642.8 |
| conjugal transfer mating pair stabilization protein trag | SAMEA3752620_04384 | Not Available | Positive | 4543731 - 4546556 | 102791.0 |
| conjugal transfer entry exclusion protein tras | SAMEA3752620_04385 | Not Available | Positive | 4546553 - 4547062 | 19435.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





