Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pesticin/yersiniabactin tonb-dependent receptor | SAMEA3752620_04252 | Not Available | Negative | 4429794 - 4431815 | 73745.1 |
| yersiniabactin siderophore biosynthetic protein | SAMEA3752620_04253 | Not Available | Negative | 4431946 - 4433523 | 57226.5 |
| yersiniabactin siderophore biosynthetic protein | SAMEA3752620_04254 | Not Available | Negative | 4433527 - 4434330 | 29754.4 |
| thiazolinyl-s-hmwp1 reductase ybtu | SAMEA3752620_04255 | Not Available | Negative | 4434327 - 4435427 | 40887.1 |
| non-ribosomal peptide synthase (yersiniabactin siderophore biosynthetic protein) | SAMEA3752620_04256 | Not Available | Negative | 4435424 - 4444915 | 348993.0 |
| phenyloxazoline synthase mbtb | SAMEA3752620_04257 | Not Available | Negative | 4445003 - 4451110 | 228679.0 |
| arac family transcriptional regulator | SAMEA3752620_04258 | Not Available | Negative | 4451301 - 4452260 | 35823.0 |
| abc transporter atp-binding/permease rpotein | SAMEA3752620_04259 | Not Available | Positive | 4452427 - 4454229 | 66301.9 |
| permease and atp-binding protein of yersiniabactin-iron abc transporter ybtq | SAMEA3752620_04260 | Not Available | Positive | 4454216 - 4456018 | 66466.4 |
| yersiniabactin-iron transporter permease ybtx | SAMEA3752620_04261 | Not Available | Positive | 4456011 - 4457291 | 44840.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





