Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3752620_04242 | Not Available | Positive | 4417536 - 4418486 | 35899.1 |
| Trna-asn | Not Available | Not Available | Positive | 4418524 - 4418599 | Not Available |
| multidrug efflux system | SAMEA3752620_04244 | Not Available | Positive | 4418793 - 4420247 | 52818.1 |
| Trna-asn | Not Available | Not Available | Positive | 4420348 - 4420423 | Not Available |
| putative cytoplasmic protein | SAMEA3752620_04246 | Not Available | Negative | 4420878 - 4421594 | 25868.5 |
| amp nucleosidase | SAMEA3752620_04247 | Not Available | Negative | 4421936 - 4423390 | 53997.9 |
| shikimate transporter | SAMEA3752620_04248 | Not Available | Negative | 4423492 - 4424808 | 47790.2 |
| adp-heptose--lps heptosyltransferase-like protein | SAMEA3752620_04249 | Not Available | Positive | 4425123 - 4426175 | 39583.6 |
| putative invasin | SAMEA3752620_04250 | Not Available | Negative | 4426431 - 4428158 | 59296.5 |
| putative invasin | SAMEA3752620_04251 | Not Available | Negative | 4428393 - 4429103 | 26502.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





