Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| insertion sequence is100, atp-binding protein | SAMEA3752620_04222 | Not Available | Positive | 4398534 - 4399313 | 29296.6 |
| uncharacterised protein | SAMEA3752620_04223 | Not Available | Negative | 4400242 - 4400844 | 23347.0 |
| interpro motifs prophage cp4-57 regulatory protein (alpa) | SAMEA3752620_04224 | Not Available | Negative | 4400938 - 4401144 | 7713.43 |
| uncharacterised protein | SAMEA3752620_04225 | Not Available | Negative | 4402277 - 4402471 | 7143.91 |
| malate transporter | SAMEA3752620_04226 | Not Available | Positive | 4402670 - 4403239 | 21842.2 |
| ybl85 | SAMEA3752620_04227 | Not Available | Positive | 4403499 - 4403900 | 15496.2 |
| dna-directed rna polymerase, beta subunit/140 kd subunit | SAMEA3752620_04228 | Not Available | Positive | 4403888 - 4404298 | 15619.7 |
| transposase | SAMEA3752620_04229 | Not Available | Positive | 4404582 - 4405961 | 52815.4 |
| phosphotriesterase | SAMEA3752620_04230 | Not Available | Negative | 4406613 - 4407647 | 37810.3 |
| putative inner membrane protein | SAMEA3752620_04231 | Not Available | Negative | 4407650 - 4407913 | 9037.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





