Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative flavoprotein | SAMEA3752620_04202 | Not Available | Negative | 4377638 - 4378234 | 20846.8 |
| stress-induced protein, kgg, repeat | SAMEA3752620_04203 | Not Available | Positive | 4378607 - 4378780 | 5883.55 |
| pyrimidine transporter | SAMEA3752620_04204 | Not Available | Negative | 4378863 - 4380191 | 45705.5 |
| oxidoreductase, flavin:nadh component | SAMEA3752620_04205 | Not Available | Negative | 4380212 - 4380706 | 17764.3 |
| putative nadh dehydrogenase/nad(p)h nitroreductase (pyrimidine utilization protein e) | SAMEA3752620_04206 | Not Available | Negative | 4380717 - 4381307 | 21661.7 |
| alternative pyrimidine degradation pathway protein | SAMEA3752620_04207 | Not Available | Negative | 4381304 - 4382116 | 29369.3 |
| pyrimidine utilization protein c | SAMEA3752620_04208 | Not Available | Negative | 4382124 - 4382510 | 13763.6 |
| isochorismatase family protein ycdl | SAMEA3752620_04209 | Not Available | Negative | 4382522 - 4383217 | 25365.2 |
| monooxygenase ycdm | SAMEA3752620_04210 | Not Available | Negative | 4383214 - 4384305 | 39959.4 |
| transcriptional regulator ycdc | SAMEA3752620_04211 | Not Available | Positive | 4384593 - 4385231 | 23688.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





