Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensory histidine kinase tors | SAMEA3752620_04192 | Not Available | Negative | 4365031 - 4367730 | 99255.0 |
| solute-binding periplasmic protein | SAMEA3752620_04193 | Not Available | Positive | 4367858 - 4368886 | 37926.9 |
| two-component response regulator | SAMEA3752620_04194 | Not Available | Negative | 4368859 - 4369551 | 26316.9 |
| cytochrome c-type protein torc | SAMEA3752620_04195 | Not Available | Positive | 4369681 - 4370853 | 43624.9 |
| trimethylamine-n-oxide reductase precursor | SAMEA3752620_04196 | Not Available | Positive | 4370853 - 4373399 | 94661.4 |
| chaperone protein tord | SAMEA3752620_04197 | Not Available | Positive | 4373396 - 4373995 | 22372.7 |
| chaperone-modulator protein | SAMEA3752620_04198 | Not Available | Negative | 4374351 - 4374656 | 11443.8 |
| curved dna-binding protein | SAMEA3752620_04199 | Not Available | Negative | 4374656 - 4375576 | 34450.9 |
| glucose-1-phosphatase | SAMEA3752620_04200 | Not Available | Positive | 4376111 - 4377352 | 45735.4 |
| putative cytoplasmic protein yccj | SAMEA3752620_04201 | Not Available | Negative | 4377390 - 4377617 | 8524.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





