Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aliphatic sulfonates abc transporter permease | SAMEA3752620_04141 | Not Available | Negative | 4313427 - 4314218 | 28957.3 |
| alkanesulfonate monooxygenase | SAMEA3752620_04142 | Not Available | Negative | 4314230 - 4315375 | 41659.5 |
| alkanesulfonate transporter substrate-binding subunit | SAMEA3752620_04143 | Not Available | Negative | 4315372 - 4316331 | 34569.8 |
| fmn reductase (sulfate starvation-induced protein | SAMEA3752620_04144 | Not Available | Negative | 4316324 - 4316899 | 21275.6 |
| dihydroorotate dehydrogenase 2 | SAMEA3752620_04145 | Not Available | Positive | 4317136 - 4318146 | 36791.7 |
| protein | SAMEA3752620_04146 | Not Available | Positive | 4318320 - 4318862 | 20589.9 |
| putative 2fe-2s iron-sulfur cluster binding protein | SAMEA3752620_04147 | Not Available | Negative | 4318859 - 4319968 | 40577.5 |
| putative rna methylase | SAMEA3752620_04148 | Not Available | Positive | 4320212 - 4322320 | 78828.5 |
| abc transporter atp-binding protein | SAMEA3752620_04149 | Not Available | Positive | 4322332 - 4324239 | 72110.2 |
| paraquat-inducible protein a | SAMEA3752620_04150 | Not Available | Positive | 4324369 - 4325622 | 46466.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





