Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase-like hydrolase | SAMEA3752620_04078 | Not Available | Negative | 4246906 - 4247622 | 27123.4 |
| tyrosine recombinase | SAMEA3752620_04079 | Not Available | Negative | 4247622 - 4248518 | 33869.7 |
| conserved protein, duf484 family | SAMEA3752620_04080 | Not Available | Negative | 4248515 - 4249222 | 26677.4 |
| diaminopimelate epimerase | SAMEA3752620_04081 | Not Available | Negative | 4249219 - 4250043 | 30210.4 |
| putative lipoprotein | SAMEA3752620_04082 | Not Available | Negative | 4250080 - 4250283 | 7207.69 |
| protein of uncharacterised function (duf3304) | SAMEA3752620_04083 | Not Available | Positive | 4250625 - 4251179 | 20646.8 |
| lipoprotein | SAMEA3752620_04084 | Not Available | Positive | 4251551 - 4253578 | 77423.9 |
| putative iron-interacting protein | SAMEA3752620_04085 | Not Available | Positive | 4253626 - 4253946 | 12232.0 |
| adenylate cyclase | SAMEA3752620_04086 | Not Available | Negative | 4253986 - 4256532 | 97735.5 |
| porphobilinogen deaminase | SAMEA3752620_04087 | Not Available | Positive | 4256898 - 4257860 | 34617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





