Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase recq | SAMEA3752620_04068 | Not Available | Negative | 4235460 - 4237295 | 68581.8 |
| phospholipase a1 (detergent resistant phospholipase a) | SAMEA3752620_04069 | Not Available | Negative | 4237414 - 4238283 | 33122.8 |
| thioesterase family protein | SAMEA3752620_04070 | Not Available | Positive | 4238448 - 4238915 | 17162.9 |
| rard protein | SAMEA3752620_04071 | Not Available | Positive | 4238967 - 4239857 | 33329.1 |
| protein of uncharacterised function (duf3289) | SAMEA3752620_04072 | Not Available | Positive | 4240168 - 4241016 | 32758.8 |
| enterobacterial putative membrane protein (duf943) | SAMEA3752620_04073 | Not Available | Positive | 4241013 - 4241510 | 19892.6 |
| magnesium and cobalt transport protein cora | SAMEA3752620_04074 | Not Available | Negative | 4241546 - 4242496 | 36591.8 |
| protein | SAMEA3752620_04075 | Not Available | Positive | 4242866 - 4243630 | 28009.1 |
| ybl178 | SAMEA3752620_04076 | Not Available | Positive | 4243713 - 4244615 | 32668.0 |
| dna helicase ii | SAMEA3752620_04077 | Not Available | Negative | 4244660 - 4246822 | 82008.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





