Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulation protein nr(ii) (two-component system sensor kinase) | SAMEA3752620_04004 | Not Available | Positive | 4172869 - 4173918 | 38558.5 |
| nitrogen regulation protein nr(i) | SAMEA3752620_04005 | Not Available | Positive | 4173930 - 4175339 | 52257.9 |
| small predicted membrane protein | SAMEA3752620_04006 | Not Available | Positive | 4175451 - 4175561 | 3618.45 |
| coproporphyrinogen iii oxidase | SAMEA3752620_04007 | Not Available | Negative | 4175751 - 4177124 | 52707.9 |
| gtpase activator | SAMEA3752620_04008 | Not Available | Negative | 4177313 - 4177822 | 19060.3 |
| gtp-binding protein | SAMEA3752620_04011 | Not Available | Positive | 4178404 - 4179036 | 23589.3 |
| dna polymerase i | SAMEA3752620_04013 | Not Available | Negative | 4179418 - 4182204 | 103198.0 |
| uncharacterised protein | SAMEA3752620_04014 | Not Available | Positive | 4182206 - 4182448 | 9370.47 |
| acyltransferase | SAMEA3752620_04015 | Not Available | Positive | 4182568 - 4183500 | 36348.2 |
| gtp-binding protein | SAMEA3752620_04016 | Not Available | Negative | 4183541 - 4184971 | 52579.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





