Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | SAMEA3752620_03993 | Not Available | Negative | 4159514 - 4160947 | 50746.8 |
| dehydrogenase | SAMEA3752620_03994 | Not Available | Negative | 4161017 - 4162027 | 35966.8 |
| aldolase yiht | SAMEA3752620_03995 | Not Available | Negative | 4162060 - 4162947 | 31713.5 |
| oxidoreductase with nad(p)-binding rossmann-fold domain, 3-hydroxyisobutyrate dehydrogenase | SAMEA3752620_03996 | Not Available | Negative | 4162972 - 4163850 | 30373.0 |
| sugar kinase yihv | SAMEA3752620_03997 | Not Available | Positive | 4164023 - 4164919 | 31655.5 |
| transcriptional regulator yihw | SAMEA3752620_03998 | Not Available | Positive | 4164959 - 4165747 | 28754.5 |
| major facilitator superfamily protein | SAMEA3752620_03999 | Not Available | Negative | 4165807 - 4167072 | 46354.0 |
| putative sugar isomerase | SAMEA3752620_04000 | Not Available | Negative | 4167174 - 4168154 | 36952.9 |
| gntr family transcriptional regulator | SAMEA3752620_04001 | Not Available | Negative | 4168162 - 4168872 | 26940.3 |
| glutamine synthetase | SAMEA3752620_04003 | Not Available | Positive | 4171286 - 4172695 | 51890.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





