Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copg-family dna-binding protein | SAMEA3752620_03983 | Not Available | Negative | 4151537 - 4151755 | 8408.23 |
| transcriptional regulator | SAMEA3752620_03984 | Not Available | Negative | 4152360 - 4152650 | 10847.1 |
| transcription elongation factor greb | SAMEA3752620_03985 | Not Available | Negative | 4152651 - 4152962 | 12190.9 |
| lipase | SAMEA3752620_03986 | Not Available | Positive | 4153191 - 4154099 | 33623.1 |
| putative acetyltransferase | SAMEA3752620_03987 | Not Available | Negative | 4154163 - 4155104 | 35339.4 |
| d-tyrosyl-trna(tyr) deacylase | SAMEA3752620_03988 | Not Available | Negative | 4155149 - 4155586 | 15951.0 |
| pp_03803 | SAMEA3752620_03989 | Not Available | Negative | 4155583 - 4156455 | Not Available |
| phosphatase | SAMEA3752620_03990 | Not Available | Negative | 4156449 - 4157048 | 22733.0 |
| galactose mutarotase | SAMEA3752620_03991 | Not Available | Negative | 4157189 - 4158076 | 32981.1 |
| transmembrane transport protein | SAMEA3752620_03992 | Not Available | Negative | 4158066 - 4159415 | 49197.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





