Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous-iron efflux pump | SAMEA3752620_03962 | Not Available | Negative | 4128219 - 4129121 | 32929.2 |
| repressor cpxp | SAMEA3752620_03963 | Not Available | Negative | 4129270 - 4129770 | 18966.4 |
| transcriptional regulatory protein cpxr | SAMEA3752620_03964 | Not Available | Positive | 4129920 - 4130618 | 26315.7 |
| two-component sensor kinase | SAMEA3752620_03965 | Not Available | Positive | 4130615 - 4131988 | 51627.3 |
| mosc domain-containing protein | SAMEA3752620_03966 | Not Available | Negative | 4132094 - 4132768 | 25301.0 |
| 2-keto-3-deoxygluconate permease | SAMEA3752620_03967 | Not Available | Negative | 4132917 - 4133900 | 33671.4 |
| mn dependent superoxide dismutase | SAMEA3752620_03968 | Not Available | Negative | 4134160 - 4134780 | 23093.2 |
| l rhamnose-proton symporter | SAMEA3752620_03969 | Not Available | Positive | 4135066 - 4136100 | 37304.1 |
| transcriptional activator rhar | SAMEA3752620_03970 | Not Available | Negative | 4136097 - 4137035 | 35624.3 |
| l-rhamnose operon regulatory protein | SAMEA3752620_03971 | Not Available | Negative | 4137019 - 4137855 | 32389.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





