Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose 1,6-bisphosphatase ii | SAMEA3752620_03952 | Not Available | Positive | 4120011 - 4121021 | 35854.6 |
| ferredoxin--nadp reductase | SAMEA3752620_03953 | Not Available | Positive | 4121118 - 4121864 | 27732.5 |
| universal stress protein d | SAMEA3752620_03954 | Not Available | Negative | 4121869 - 4122297 | 16276.0 |
| conserved protein, upf0381 family | SAMEA3752620_03955 | Not Available | Negative | 4122324 - 4122623 | 10746.7 |
| inner membrane protein | SAMEA3752620_03956 | Not Available | Negative | 4122835 - 4123275 | 16542.6 |
| protein of uncharacterised function (duf1454) | SAMEA3752620_03957 | Not Available | Positive | 4123376 - 4123975 | 21662.1 |
| triosephosphate isomerase | SAMEA3752620_03958 | Not Available | Positive | 4124083 - 4124850 | 26973.3 |
| cdp-diacylglycerol pyrophosphatase | SAMEA3752620_03959 | Not Available | Negative | 4124905 - 4125660 | 28384.2 |
| sulfate-binding protein (sulfate starvation-induced protein 2) | SAMEA3752620_03960 | Not Available | Negative | 4125767 - 4126756 | 36689.2 |
| 6-phosphofructokinase | SAMEA3752620_03961 | Not Available | Negative | 4127076 - 4128038 | 34858.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





