Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail assembly protein i from prophage | SAMEA3752620_03900 | Not Available | Negative | 4057541 - 4058089 | 19037.0 |
| putative tail fiber component k of prophage | SAMEA3752620_03901 | Not Available | Negative | 4058086 - 4058685 | 23062.3 |
| glutamate racemase | SAMEA3752620_03902 | Not Available | Negative | 4059186 - 4060043 | 31191.8 |
| vitamin b12/cobalamin outer membrane transporter | SAMEA3752620_03903 | Not Available | Negative | 4059988 - 4061832 | 68638.3 |
| trna (uracil-5)-methyltransferase | SAMEA3752620_03905 | Not Available | Positive | 4062201 - 4063301 | 41982.4 |
| inner membrane protein | SAMEA3752620_03906 | Not Available | Negative | 4063341 - 4063700 | 13038.3 |
| tetr-family transcriptional regulator | SAMEA3752620_03907 | Not Available | Negative | 4063700 - 4064404 | 26554.9 |
| soluble pyridine nucleotide transhydrogenase | SAMEA3752620_03908 | Not Available | Positive | 4064682 - 4066082 | 51563.4 |
| dna-binding transcriptional regulator oxyr | SAMEA3752620_03909 | Not Available | Negative | 4066065 - 4066982 | 34278.0 |
| transporter | SAMEA3752620_03911 | Not Available | Negative | 4067234 - 4068517 | 46359.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





