Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine-n-oxide reductase 2 | SAMEA3752620_03796 | Not Available | Negative | 3960711 - 3963140 | 88811.7 |
| cytochrome c-type protein | SAMEA3752620_03797 | Not Available | Negative | 3963165 - 3964265 | 40293.6 |
| copper homeostasis protein | SAMEA3752620_03798 | Not Available | Negative | 3964653 - 3965399 | 26642.2 |
| protein yecm | SAMEA3752620_03799 | Not Available | Negative | 3965413 - 3965979 | 21194.1 |
| arginyl-trna synthetase | SAMEA3752620_03800 | Not Available | Positive | 3966195 - 3967928 | 64686.7 |
| flagellar protein flhe | SAMEA3752620_03801 | Not Available | Negative | 3967981 - 3968376 | 14145.5 |
| flagellar biosynthesis protein flha | SAMEA3752620_03802 | Not Available | Negative | 3968373 - 3970451 | 74842.6 |
| flagellar biosynthesis protein flhb | SAMEA3752620_03803 | Not Available | Negative | 3970444 - 3971592 | 42272.4 |
| chemotaxis regulator chez | SAMEA3752620_03804 | Not Available | Negative | 3971794 - 3972438 | 23977.4 |
| chemotaxis protein chey | SAMEA3752620_03805 | Not Available | Negative | 3972449 - 3972838 | 14116.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





