Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3752620_03786 | Not Available | Positive | 3952384 - 3952986 | 22707.2 |
| holliday junction resolvase | SAMEA3752620_03787 | Not Available | Negative | 3952988 - 3953509 | 18747.9 |
| yebc/pmpr family dna-binding regulatory protein | SAMEA3752620_03788 | Not Available | Negative | 3953544 - 3954284 | 26438.1 |
| datp pyrophosphohydrolase | SAMEA3752620_03789 | Not Available | Negative | 3954313 - 3954822 | 19330.9 |
| aspartyl-trna synthetase | SAMEA3752620_03790 | Not Available | Negative | 3954883 - 3956655 | 65873.2 |
| putative isochorismatase | SAMEA3752620_03791 | Not Available | Positive | 3956965 - 3957531 | 20476.4 |
| conserved protein, upf0759 family | SAMEA3752620_03792 | Not Available | Positive | 3957528 - 3958346 | 31534.9 |
| inner membrane protein | SAMEA3752620_03793 | Not Available | Positive | 3958399 - 3958794 | 15227.2 |
| protein yeco | SAMEA3752620_03794 | Not Available | Positive | 3958835 - 3959578 | 27792.3 |
| putative methyltransferase | SAMEA3752620_03795 | Not Available | Positive | 3959575 - 3960546 | 37008.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





