Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein psie | SAMEA3752620_03720 | Not Available | Negative | 3886715 - 3887125 | 15597.7 |
| putative lipoprotein | SAMEA3752620_03721 | Not Available | Negative | 3887661 - 3889757 | 78538.1 |
| group 4 capsule (g4c) polysaccharide, ymcb | SAMEA3752620_03722 | Not Available | Negative | 3889757 - 3890494 | 26262.4 |
| lipoprotein yjbf | SAMEA3752620_03723 | Not Available | Negative | 3890491 - 3891129 | 23769.2 |
| exopolysaccharide production protein yjbe | SAMEA3752620_03724 | Not Available | Negative | 3891316 - 3891558 | 7400.49 |
| glucosephosphate isomerase | SAMEA3752620_03726 | Not Available | Negative | 3892056 - 3893705 | 61533.1 |
| lysine-sensitive aspartokinase iii | SAMEA3752620_03728 | Not Available | Positive | 3894230 - 3895579 | 48638.7 |
| yjbd family (duf3811) | SAMEA3752620_03729 | Not Available | Positive | 3895833 - 3896105 | 10488.6 |
| ribosomal large subunit pseudouridine synthase f | SAMEA3752620_03730 | Not Available | Negative | 3896106 - 3896978 | 32436.4 |
| transcriptional regulator of sorbose uptake and utilization genes | SAMEA3752620_03731 | Not Available | Positive | 3897326 - 3898273 | 34978.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





