Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative xanthine/uracil permeases family protein yjcd | SAMEA3752620_03689 | Not Available | Negative | 3852906 - 3854255 | 45778.5 |
| arac family transcriptional regulator | SAMEA3752620_03691 | Not Available | Positive | 3855351 - 3855674 | 12911.6 |
| putative signal transduction protein | SAMEA3752620_03692 | Not Available | Negative | 3855677 - 3857263 | 60658.4 |
| inner membrane protein | SAMEA3752620_03693 | Not Available | Positive | 3857692 - 3857973 | 10304.0 |
| single-strand binding protein | SAMEA3752620_03694 | Not Available | Negative | 3858072 - 3858608 | 18976.1 |
| excision nuclease subunit a | SAMEA3752620_03695 | Not Available | Positive | 3858863 - 3861685 | 103874.0 |
| putative cytoplasmic protein yjbr | SAMEA3752620_03696 | Not Available | Negative | 3861720 - 3862076 | 13467.1 |
| thiamin phosphate synthase | SAMEA3752620_03697 | Not Available | Negative | 3862080 - 3862496 | 15656.8 |
| acid phosphatase/phosphotransferase | SAMEA3752620_03698 | Not Available | Negative | 3862607 - 3863320 | 26117.9 |
| uncharacterised protein | SAMEA3752620_03699 | Not Available | Positive | 3863722 - 3864225 | 19300.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





