Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent nitrite reductase complex subunit | SAMEA3752620_03679 | Not Available | Negative | 3840731 - 3841114 | 14603.0 |
| heme lyase subunit nrfe | SAMEA3752620_03680 | Not Available | Negative | 3841107 - 3842729 | 60325.9 |
| cytochrome c-type biogenesis protein | SAMEA3752620_03681 | Not Available | Negative | 3842845 - 3843801 | 34984.3 |
| cytochrome c-type biogenesis protein | SAMEA3752620_03682 | Not Available | Negative | 3843798 - 3844469 | 24554.7 |
| cytochrome c nitrite reductase pentaheme subunit | SAMEA3752620_03683 | Not Available | Negative | 3844466 - 3845032 | 20715.6 |
| cytochrome c552 | SAMEA3752620_03684 | Not Available | Negative | 3845077 - 3846513 | 53678.6 |
| acetyl-coenzyme a synthetase | SAMEA3752620_03685 | Not Available | Positive | 3846905 - 3848863 | 72134.5 |
| inner membrane protein yjch | SAMEA3752620_03686 | Not Available | Positive | 3849063 - 3849377 | 11672.3 |
| cation/acetate symporter | SAMEA3752620_03687 | Not Available | Positive | 3849374 - 3851023 | 59195.7 |
| putative sodium/hydrogen exchanger | SAMEA3752620_03688 | Not Available | Negative | 3851106 - 3852755 | 60527.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





