Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein | SAMEA3752620_03627 | Not Available | Negative | 3783155 - 3783385 | 8649.49 |
| two-component sensor kinase | SAMEA3752620_03628 | Not Available | Positive | 3783565 - 3785196 | 60554.4 |
| two-component response regulator | SAMEA3752620_03629 | Not Available | Positive | 3785193 - 3785912 | 27489.9 |
| anaerobic c4-dicarboxylate transporter dcub | SAMEA3752620_03630 | Not Available | Positive | 3786483 - 3787823 | 47952.2 |
| tartrate/fumarate subfamily fe-s type hydro-lyase subunit beta | SAMEA3752620_03631 | Not Available | Positive | 3787901 - 3789547 | 60104.7 |
| putative inner membrane protein | SAMEA3752620_03632 | Not Available | Positive | 3789670 - 3790299 | 23378.3 |
| melibiose:sodium symporter | SAMEA3752620_03633 | Not Available | Negative | 3790438 - 3791847 | 52192.9 |
| alpha-galactosidase | SAMEA3752620_03634 | Not Available | Negative | 3791962 - 3793317 | 50672.9 |
| melibiose operon regulatory protein | SAMEA3752620_03635 | Not Available | Positive | 3793600 - 3794508 | 34929.9 |
| biodegradative arginine decarboxylase | SAMEA3752620_03636 | Not Available | Positive | 3794704 - 3796974 | 84631.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





