Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit chi | SAMEA3752620_03576 | Not Available | Negative | 3726751 - 3727233 | 18135.3 |
| cytosol aminopeptidase | SAMEA3752620_03577 | Not Available | Negative | 3727328 - 3728839 | 54897.1 |
| putative permease | SAMEA3752620_03578 | Not Available | Positive | 3729127 - 3730206 | 39488.9 |
| putative permease | SAMEA3752620_03579 | Not Available | Positive | 3730206 - 3731288 | 39621.0 |
| atpase | SAMEA3752620_03580 | Not Available | Negative | 3731449 - 3732951 | 54352.5 |
| oxidoreductase | SAMEA3752620_03581 | Not Available | Negative | 3733081 - 3734100 | 36486.0 |
| Trna-leu | Not Available | Not Available | Positive | 3734296 - 3734380 | Not Available |
| phage integrase family site specific recombinase | SAMEA3752620_03583 | Not Available | Positive | 3734567 - 3735832 | 48161.0 |
| putative membrane-associated, metal-dependent hydrolase | SAMEA3752620_03584 | Not Available | Negative | 3736156 - 3737655 | 55782.3 |
| heat resistant agglutinin 1 | SAMEA3752620_03585 | Not Available | Negative | 3737829 - 3738569 | 26986.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





