Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endoribonuclease | SAMEA3752620_03566 | Not Available | Negative | 3715920 - 3716315 | 14590.1 |
| putative short chain dehydrogenase | SAMEA3752620_03567 | Not Available | Negative | 3716447 - 3717160 | 24620.6 |
| tetr family transcriptional regulator | SAMEA3752620_03568 | Not Available | Positive | 3717231 - 3717824 | 21347.5 |
| toxin-antitoxin biofilm protein | SAMEA3752620_03569 | Not Available | Positive | 3717969 - 3718421 | 16901.4 |
| protein | SAMEA3752620_03570 | Not Available | Positive | 3718544 - 3720184 | 63479.4 |
| ornithine carbamoyltransferase 1 | SAMEA3752620_03571 | Not Available | Negative | 3720313 - 3721326 | 37205.6 |
| rnase e inhibitor protein | SAMEA3752620_03572 | Not Available | Positive | 3721488 - 3721904 | 15603.5 |
| putative acetyltransferase | SAMEA3752620_03573 | Not Available | Negative | 3721950 - 3722453 | 18592.5 |
| inner membrane protein | SAMEA3752620_03574 | Not Available | Positive | 3722646 - 3723842 | 44932.2 |
| valyl-trna synthetase | SAMEA3752620_03575 | Not Available | Negative | 3723896 - 3726751 | 108227.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





