Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal replication protein n | SAMEA3752620_03514 | Not Available | Positive | 3658159 - 3658473 | 11472.9 |
| 30s ribosomal protein s18 | SAMEA3752620_03515 | Not Available | Positive | 3658478 - 3658705 | 8986.94 |
| 50s ribosomal protein l9 | SAMEA3752620_03516 | Not Available | Positive | 3658747 - 3659196 | 15770.0 |
| dna-binding protein | SAMEA3752620_03517 | Not Available | Positive | 3659598 - 3660089 | 17602.4 |
| hipa-like n-terminal domain family | SAMEA3752620_03518 | Not Available | Positive | 3660092 - 3661195 | 41699.6 |
| permease | SAMEA3752620_03519 | Not Available | Negative | 3661497 - 3662774 | 46873.9 |
| fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein | SAMEA3752620_03520 | Not Available | Negative | 3662867 - 3664939 | 75598.1 |
| acetyl-coa:acetoacetyl-coa transferase subunit beta | SAMEA3752620_03521 | Not Available | Negative | 3664936 - 3666477 | 55573.6 |
| ybl213 | SAMEA3752620_03522 | Not Available | Negative | 3666487 - 3667263 | 28553.5 |
| endonuclease | SAMEA3752620_03523 | Not Available | Negative | 3667273 - 3668115 | 31037.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





