Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor-family transcriptional regulator | SAMEA3752620_03504 | Not Available | Negative | 3650337 - 3651092 | 27603.6 |
| l-ascorbate 6-phosphate lactonase | SAMEA3752620_03505 | Not Available | Negative | 3651200 - 3652264 | 40078.7 |
| pts system ascorbate-specific transporter subunit iic | SAMEA3752620_03506 | Not Available | Positive | 3652619 - 3654016 | 50731.6 |
| pts system l-ascorbate-specific transporter subunit iib | SAMEA3752620_03507 | Not Available | Positive | 3654032 - 3654337 | 10896.3 |
| ascorbate-specific pts system eiia component | SAMEA3752620_03508 | Not Available | Positive | 3654347 - 3654811 | 17226.5 |
| 3-keto-l-gulonate-6-phosphate decarboxylase | SAMEA3752620_03509 | Not Available | Positive | 3654825 - 3655475 | 23579.4 |
| l-xylulose 5-phosphate 3-epimerase | SAMEA3752620_03510 | Not Available | Positive | 3655485 - 3656339 | 32018.4 |
| l-ribulose-5-phosphate 4-epimerase ulaf | SAMEA3752620_03511 | Not Available | Positive | 3656339 - 3657025 | 25326.1 |
| protein | SAMEA3752620_03512 | Not Available | Negative | 3657154 - 3657429 | 10149.9 |
| 30s ribosomal protein s6 | SAMEA3752620_03513 | Not Available | Positive | 3657757 - 3658152 | 15187.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





