Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil phosphoribosyltransferase | SAMEA3752620_00099 | Not Available | Positive | 116323 - 116949 | 22534.6 |
| uracil transporter | SAMEA3752620_00100 | Not Available | Positive | 117035 - 118324 | 45095.1 |
| dnaa family protein hda | SAMEA3752620_00101 | Not Available | Positive | 118374 - 119120 | 28371.4 |
| putative glutaredoxin | SAMEA3752620_00102 | Not Available | Negative | 119226 - 119585 | 13417.4 |
| putative peptidase | SAMEA3752620_00103 | Not Available | Negative | 119606 - 121069 | 53951.1 |
| putative permease | SAMEA3752620_00104 | Not Available | Positive | 121282 - 122343 | 39182.9 |
| thioredoxin-dependent thiol peroxidase | SAMEA3752620_00105 | Not Available | Negative | 122442 - 122912 | 17634.9 |
| glycine cleavage system transcriptional repressor | SAMEA3752620_00106 | Not Available | Negative | 122912 - 123484 | 20769.8 |
| dihydrodipicolinate synthase | SAMEA3752620_00107 | Not Available | Positive | 123630 - 124508 | 31285.9 |
| lipoprotein | SAMEA3752620_00108 | Not Available | Positive | 124525 - 125559 | 36844.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





