Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic protein | SAMEA3752620_03494 | Not Available | Positive | 3642782 - 3643183 | 14955.9 |
| phage shock protein a | SAMEA3752620_03495 | Not Available | Positive | 3643202 - 3643900 | 25335.0 |
| conserved protein, duf2491 family | SAMEA3752620_03496 | Not Available | Positive | 3643950 - 3644609 | 25029.4 |
| membrane protein yjfl | SAMEA3752620_03497 | Not Available | Positive | 3644627 - 3645025 | 14242.7 |
| putative membrane protein yjfm | SAMEA3752620_03498 | Not Available | Positive | 3645035 - 3645673 | 23421.1 |
| glutathionylspermidine synthase yjfc | SAMEA3752620_03499 | Not Available | Positive | 3645676 - 3646839 | 45008.9 |
| isovaleryl coa dehydrogenase | SAMEA3752620_03500 | Not Available | Positive | 3646923 - 3648548 | 60638.5 |
| protein | SAMEA3752620_03501 | Not Available | Negative | 3648656 - 3648931 | 9983.65 |
| putative lipoprotein | SAMEA3752620_03502 | Not Available | Negative | 3649080 - 3649409 | 12066.7 |
| putative esterase | SAMEA3752620_03503 | Not Available | Positive | 3649591 - 3650340 | 27493.8 |
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





