Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna delta-2-isopentenylpyrophosphate (ipp) transferase | SAMEA3752620_03484 | Not Available | Positive | 3631989 - 3632939 | 35081.2 |
| host factor-i protein (hf-i) | SAMEA3752620_03485 | Not Available | Positive | 3633025 - 3633333 | 11167.0 |
| gtp-binding protein | SAMEA3752620_03486 | Not Available | Positive | 3633410 - 3634690 | 48329.0 |
| hflk protein | SAMEA3752620_03487 | Not Available | Positive | 3634776 - 3636035 | 45548.5 |
| hflc protein | SAMEA3752620_03488 | Not Available | Positive | 3636038 - 3637042 | 37655.0 |
| membrane protein yjet | SAMEA3752620_03489 | Not Available | Positive | 3637124 - 3637321 | 7166.26 |
| adenylosuccinate synthetase | SAMEA3752620_03490 | Not Available | Positive | 3637425 - 3638723 | 47347.7 |
| transcriptional repressor nsrr | SAMEA3752620_03491 | Not Available | Positive | 3638928 - 3639353 | 15594.0 |
| exoribonuclease r | SAMEA3752620_03492 | Not Available | Positive | 3639392 - 3641833 | 92134.5 |
| 23s rrna (guanosine-2'-o-)-methyltransferase rlmb | SAMEA3752620_03493 | Not Available | Positive | 3641924 - 3642655 | 26558.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





