Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 10 kda chaperonin (protein cpn10) (groes protein) | SAMEA3752620_03453 | Not Available | Positive | 3603448 - 3603741 | 10387.6 |
| chaperonin cpn60 | SAMEA3752620_03454 | Not Available | Positive | 3603785 - 3605431 | 57332.4 |
| putative lipoprotein | SAMEA3752620_03455 | Not Available | Positive | 3605569 - 3605922 | 11959.2 |
| protein | SAMEA3752620_03456 | Not Available | Negative | 3605972 - 3606841 | 33067.0 |
| radical sam superfamily protein | SAMEA3752620_03457 | Not Available | Negative | 3607233 - 3608261 | 38726.8 |
| elongation factor p (ef-p) | SAMEA3752620_03458 | Not Available | Positive | 3608303 - 3608869 | 20592.4 |
| entericidin b | SAMEA3752620_03459 | Not Available | Positive | 3609157 - 3609303 | 4809.81 |
| quaternary ammonium compound-resistance protein | SAMEA3752620_03461 | Not Available | Positive | 3609478 - 3609795 | 10901.0 |
| outer membrane lipoprotein | SAMEA3752620_03462 | Not Available | Negative | 3609792 - 3610325 | 19924.7 |
| beta-lactamase | SAMEA3752620_03463 | Not Available | Negative | 3610414 - 3611547 | 41372.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





