Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shia-like protein | SAMEA3752620_03443 | Not Available | Negative | 3592550 - 3593593 | 40203.8 |
| integrase | SAMEA3752620_03444 | Not Available | Negative | 3593849 - 3595114 | 48036.2 |
| Trna-phe | Not Available | Not Available | Positive | 3595312 - 3595387 | Not Available |
| putative transcriptional regulator | SAMEA3752620_03446 | Not Available | Negative | 3595494 - 3596069 | 21941.3 |
| thiol:disulfide interchange protein | SAMEA3752620_03447 | Not Available | Negative | 3596106 - 3597803 | 61888.8 |
| divalent cation tolerance protein | SAMEA3752620_03448 | Not Available | Negative | 3597779 - 3598117 | 12307.7 |
| anaerobic c4-dicarboxylate transporter | SAMEA3752620_03449 | Not Available | Negative | 3598232 - 3599533 | 45753.5 |
| aspartate ammonia-lyase | SAMEA3752620_03450 | Not Available | Negative | 3599651 - 3601087 | 52359.2 |
| protein fxsa (suppressor of f exclusion of phage t7) | SAMEA3752620_03451 | Not Available | Positive | 3601424 - 3601900 | 17660.0 |
| inner membrane protein yjeh | SAMEA3752620_03452 | Not Available | Negative | 3601916 - 3603172 | 44704.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





