Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit i | SAMEA3752620_03423 | Not Available | Negative | 3567245 - 3567625 | 13632.5 |
| glucose inhibited division protein | SAMEA3752620_03424 | Not Available | Negative | 3568242 - 3568865 | 23429.5 |
| glucose-inhibited division protein a | SAMEA3752620_03425 | Not Available | Negative | 3568929 - 3570818 | 69525.4 |
| flavoprotein | SAMEA3752620_03426 | Not Available | Negative | 3571197 - 3571640 | 15812.5 |
| regulatory protein asnc | SAMEA3752620_03427 | Not Available | Negative | 3571730 - 3572188 | 16888.7 |
| aspartate--ammonia ligase (asparagine synthetase a) | SAMEA3752620_03428 | Not Available | Positive | 3572340 - 3573332 | 36652.6 |
| protein viaa (vwa domain protein interacting with aaa atpase) | SAMEA3752620_03429 | Not Available | Negative | 3573337 - 3574788 | 55910.6 |
| regulatory atpase rava | SAMEA3752620_03430 | Not Available | Negative | 3574782 - 3576278 | 56405.1 |
| kup system potassium uptake protein | SAMEA3752620_03431 | Not Available | Positive | 3576501 - 3578369 | 69326.4 |
| d-ribose high-affinity transporter | SAMEA3752620_03432 | Not Available | Positive | 3578536 - 3578955 | 15293.4 |
Pathways
631 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





