Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine--fructose-6-phosphate aminotransferase | SAMEA3752620_03412 | Not Available | Negative | 3557023 - 3558852 | 66870.3 |
| bifunctional protein glmu | SAMEA3752620_03413 | Not Available | Negative | 3559014 - 3560384 | 49209.1 |
| membrane-bound atp synthase | SAMEA3752620_03415 | Not Available | Negative | 3560738 - 3561157 | 15069.2 |
| atp synthase subunit beta | SAMEA3752620_03416 | Not Available | Negative | 3561178 - 3562560 | 50328.5 |
| membrane-bound atp synthase f1 sector gamma-subunit | SAMEA3752620_03417 | Not Available | Negative | 3562587 - 3563450 | 31579.3 |
| atp synthase subunit alpha | SAMEA3752620_03418 | Not Available | Negative | 3563501 - 3565042 | 55225.4 |
| atp synthase subunit delta | SAMEA3752620_03419 | Not Available | Negative | 3565055 - 3565588 | 19333.3 |
| membrane-bound atp synthase f0 sector subunit b | SAMEA3752620_03420 | Not Available | Negative | 3565603 - 3566073 | 17264.9 |
| membrane-bound atp synthase f0 sector subunit c | SAMEA3752620_03421 | Not Available | Negative | 3566135 - 3566374 | 8256.71 |
| membrane-bound atp synthase f0 sector subunit a | SAMEA3752620_03422 | Not Available | Negative | 3566421 - 3567236 | 30314.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





