Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphopantetheinyl transferase | SAMEA3752620_03392 | Not Available | Positive | 3534548 - 3535297 | 27648.2 |
| putative nadph-dependent fmn reductase | SAMEA3752620_03393 | Not Available | Positive | 3535319 - 3535885 | 20376.8 |
| putative permease | SAMEA3752620_03394 | Not Available | Negative | 3535939 - 3537276 | 46815.7 |
| putative phosphatase | SAMEA3752620_03395 | Not Available | Positive | 3537443 - 3538108 | 24783.8 |
| inner membrane protein | SAMEA3752620_03396 | Not Available | Positive | 3538175 - 3538648 | 16914.7 |
| 6-phosphogluconolactonase | SAMEA3752620_03397 | Not Available | Negative | 3538730 - 3539452 | 26265.8 |
| xylanase | SAMEA3752620_03398 | Not Available | Negative | 3539467 - 3540636 | 42766.3 |
| outer membrane protein yiec | SAMEA3752620_03399 | Not Available | Negative | 3540663 - 3542279 | 60623.2 |
| glycoside hydrolase family protein | SAMEA3752620_03400 | Not Available | Negative | 3542365 - 3543759 | 52467.4 |
| pts system beta-glucoside-specific transporter subunit iiabc | SAMEA3752620_03401 | Not Available | Negative | 3543778 - 3545652 | 66393.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





