Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative carbohydrate transporter | SAMEA3752620_03340 | Not Available | Negative | 3478498 - 3479880 | 50999.5 |
| Trna-sec(p) | Not Available | Not Available | Positive | 3480173 - 3480263 | Not Available |
| putative rhum-like cytoplasmic protein | SAMEA3752620_03342 | Not Available | Positive | 3480320 - 3481357 | 40226.7 |
| uncharacterised protein | SAMEA3752620_03343 | Not Available | Positive | 3481927 - 3482424 | 18637.1 |
| transport protein yicl | SAMEA3752620_03344 | Not Available | Positive | 3482591 - 3483514 | 33093.4 |
| lipoprotein-28 | SAMEA3752620_03345 | Not Available | Negative | 3483518 - 3484336 | 29443.2 |
| putative transport protein | SAMEA3752620_03346 | Not Available | Positive | 3484558 - 3484851 | 11061.4 |
| ribonucleoside transporter | SAMEA3752620_03347 | Not Available | Negative | 3484892 - 3486130 | 43618.6 |
| protein of uncharacterised function (duf1198) | SAMEA3752620_03348 | Not Available | Negative | 3486293 - 3486745 | 17220.1 |
| putative permease | SAMEA3752620_03349 | Not Available | Negative | 3486798 - 3488132 | 46986.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





