Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0562 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1265645 bp
Thymine Count
1265739 bp
Guanine Count
1312556 bp
Cytosine Count
1288380 bp
Genome Length
5135073 bp
Protein-coding Genes
4552 genes
Non-Coding Genes
281 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma family protein | SAMEA3752620_03330 | Not Available | Positive | 3467180 - 3468889 | 62284.8 |
| putative sugar related regulatory protein | SAMEA3752620_03331 | Not Available | Negative | 3468932 - 3469612 | 26154.1 |
| putative sugar kinase/transcriptional regulator. atpase domain | SAMEA3752620_03332 | Not Available | Negative | 3469593 - 3470525 | 32958.6 |
| fructose-bisphosphate aldolase | SAMEA3752620_03333 | Not Available | Negative | 3470573 - 3471433 | 30815.0 |
| fructose-bisphosphate aldolase class-ii | SAMEA3752620_03334 | Not Available | Negative | 3471514 - 3472365 | 30040.3 |
| pts enzyme-ii fructose | SAMEA3752620_03335 | Not Available | Negative | 3472377 - 3473468 | 38783.1 |
| pts system, fructose-like-2 iib component 1 | SAMEA3752620_03336 | Not Available | Negative | 3473493 - 3473807 | 11244.9 |
| phosphotransferase system (pts), fructose-specific | SAMEA3752620_03337 | Not Available | Negative | 3473825 - 3474295 | 17439.7 |
| transcriptional antiterminator | SAMEA3752620_03338 | Not Available | Negative | 3474322 - 3475875 | 58927.1 |
| putative glycosyl hydrolase | SAMEA3752620_03339 | Not Available | Negative | 3476170 - 3478488 | 87971.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





